species:   Artha
pid:       MI0015819
parent:    ath-MIR4239
paralog:   
locus:     4:11368752-11368874
matures:   ['UUUGUUAUUUUCGCAUGCUCC', 'AGCAUACGGCGAUAACGAAAA']
srr:       SRR9216049
genome:    /Users/jax/+Genomes/Plant_genomes/Artha.TAIR10_chr_all.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216049.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216049.cram 4:11368752-11368874

0 out of bounds
2 alignments
1 proper strand
1 stranded perfect matches

             *************************                                            *************************                
UCUUGUUUGCACAUUUUGUCUUUGUUAUUUUCGCAUGCUCCUUUGAAACUUUUUGUGCAUGGAUGUGAAACUCUUCACUGGAGCAUACGGCGAUAACGAAAACAAGGUGUGCAUAUAAACUUU
..((((.((((((((((((.(((((((((.(((.(((((((..((((...((((..(((....)))))))...))))..))))))).))).))))))))).)))))))))))).)))).....
--------------------UUUGUUAUUUUCGCAUGCUCC---------------------------------------------------------------------------------- l=21 a=0 c
---------------------------------------------------------------------------------AGCAUACGGCGAUAACGAAAA--------------------- l=21 a=0 c*
------------------------------------------------------------------------------------AUACGGCGAUAACGAAAACAAGG---------------- l=23 a=1 ma
---------------UUGUCUUUGUUAUUUUCGCAUGC------------------------------------------------------------------------------------- l=23 a=0 ma*

------------------------------------------------------------------------------------AUACGGCGAUAACGAAAACAAGG---------------- l=23 a=1 (ma)

mb-01011
ax-1011011
ku-01
ss-110110011100
fn-001
